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Development Activity

June 13, 2012 at 11:21 MDT

Added half-assed top hit(s) per reference button. Needs attention!

June 13, 2012 at 09:38 MDT

Fixed link to detailed Quorum view bug. Renamed LSS method.

June 12, 2012 at 17:30 MDT

Added buttons to view. (Expand Tree, Top Hits and Top Hit / Ref Seq)

June 12, 2012 at 15:14 MDT

Added Evalue Filter input field to d3 tree.

June 12, 2012 at 10:04 MDT

Added new level to tree (Query). Algo - Ref - Chromo - Query - HSPs

June 11, 2012 at 13:33 MDT

Updated Rails to 3.0.13. Added Session#sweep to remove stale sessions.

June 08, 2012 at 11:20 MDT

Multi query sequence bug fix. Rename Quorum hit id property to quorum_id to avoid name collision with d3 tree node id.

June 07, 2012 at 16:16 MDT

Added top hit initialization to tree. NOTE: Only works for single query sequence.

June 06, 2012 at 16:11 MDT

Working example of interactive tree per blast result set.

June 04, 2012 at 12:01 MDT

Initial commit

May 07, 2012 at 15:45 MDT

Replaced ruby-debug19 with debugger.

April 27, 2012 at 11:12 MDT

Updated release script. Removed current_path checks from request specs.

April 27, 2012 at 10:06 MDT

Removed current_path checks in request specs. Selenium returns false negatives. Switched to Capybara default driver after Selenium.

April 20, 2012 at 12:23 MDT

Added request specs. Cleaned file permissions and trailing whitespace.

April 19, 2012 at 17:33 MDT

Pushed arahy changes to the rest of the species.

April 19, 2012 at 12:38 MDT

Updated Arahy Gems (Rails 3.0.12, devise_cas_auth 1.1.1). Removed trailing whitespace. Refactored edit menu dropdowns. Added request specs.

February 27, 2012 at 16:05 MST

Added Maps tab to species pages.

February 27, 2012 at 14:40 MST

Moved from SQL to Rails migrations. Added species maps migration. Removed unused pages. Removed title and helper. Added helper specs.

January 10, 2012 at 14:52 MST

Added pigeonpea to Genome Browsers on the home page.

January 03, 2012 at 14:52 MST

Moved CKFinder license and key to new file.